Stem-loop ppy-mir-298

Accession

MI0014876

Description

Pongo pygmaeus ppy-mir-298 precursor miRNA

Gene family

MIPF0000206; mir-298

Sequence

ucaggucuucAGCAGAAGCAGGGCGGUUCUCCCAgugguuuuccuugacugugaggaacuagccugcugcuuugcucaggagugagcu
(((..((((.((((((((((((..((((((.(((((.(.......).)))).).))))))..))))))..)))))).)))).)))...

Structure

---   gg    c      --      GC      C -    g uu 
   uca  ucuu AGCAGA  AGCAGG  GGUUCU C CAgu g  u
   |||  |||| ||||||  ||||||  |||||| | |||| |  u
   agu  agga ucguuu  ucgucc  ucaagg g guca u  c
ucg   -g    c      cg      ga      a u    g uc 

Annotation confidence Not enough data

Genome context

chr20: 56914694-56914781 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-298

Mature ppy-miR-298

• Accession: MIMAT0015812
• Description: Pongo pygmaeus ppy-miR-298 mature miRNA
• Sequence: 11 - AGCAGAAGCAGGGCGGUUCUCCCA - 34
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64