miRBase entry: ppy-mir-299

Stem-loop ppy-mir-299

Accession

MI0014877

Description

Pongo pygmaeus ppy-mir-299 precursor miRNA

Gene family

MIPF0000186; mir-299

Sequence

aagaaaUGGUUUACCGUCCCACAUACAUuuugaauaugUAUGUGGGACGGUAAACCGCUUcuu
(((((.((((((((((((((((((((((.......)))))))))))))))))))))).)))))

Structure

     a                      uu 
aagaa UGGUUUACCGUCCCACAUACAU  u
||||| ||||||||||||||||||||||  g
uucUU GCCAAAUGGCAGGGUGUAUgua  a
     C                      ua

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr14: 102585203-102585265 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from ppy-mir-299

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-299-5p

Accession	MIMAT0015813
Description	Pongo pygmaeus ppy-miR-299-5p mature miRNA
Sequence	7 - UGGUUUACCGUCCCACAUACAU - 28
Evidence	not_experimental

Mature ppy-miR-299-3p

Accession	MIMAT0015814
Description	Pongo pygmaeus ppy-miR-299-3p mature miRNA
Sequence	39 - UAUGUGGGACGGUAAACCGCUU - 60
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64