Stem-loop sequence ppy-mir-300

AccessionMI0014878 (change log)
DescriptionPongo pygmaeus miR-300 stem-loop
Gene family MIPF0000018; mir-154
Stem-loop 
   --    a   ga      guaa     ---caug    u  uu 
5'   ugcu cuu  agagag    uccuu       cauu gc  u
     |||| |||  ||||||    |||||       |||| ||  a
3'   acga ggg  ucucuc    gggaa       guaa cg  c
   aa    g   uc      agac     cauauua    -  uu
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Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (P_pygmaeus_2.0.2; GCF_000001545.4) Overlapping transcripts
chr14: 102603492-102603574 [+]
intergenic
Clustered miRNAs
< 10kb from ppy-mir-300
ppy-mir-495chr14: 102595205-102595283 [+]
ppy-mir-376cchr14: 102601818-102601883 [+]
ppy-mir-376a-2chr14: 102602202-102602281 [+]
ppy-mir-654chr14: 102602352-102602432 [+]
ppy-mir-376bchr14: 102602569-102602668 [+]
ppy-mir-376a-1chr14: 102602915-102602982 [+]
ppy-mir-300chr14: 102603492-102603574 [+]
ppy-mir-1185-1chr14: 102605109-102605194 [+]
ppy-mir-1185-2chr14: 102606330-102606415 [+]
ppy-mir-381chr14: 102608058-102608132 [+]
ppy-mir-487bchr14: 102608591-102608674 [+]
ppy-mir-539chr14: 102609453-102609530 [+]
ppy-mir-889chr14: 102610033-102610111 [+]
ppy-mir-544chr14: 102610806-102610896 [+]
ppy-mir-655chr14: 102611698-102611794 [+]
Database links

Mature sequence ppy-miR-300

Accession MIMAT0015815
Sequence

52 -  

uauacaagggcagacucucucu

 - 73

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Evidence not experimental

References

1
PMID:20214803 "Genome-wide comparative analysis of microRNAs in three non-human primates" Brameier M BMC Res Notes. 3:64(2010).