Stem-loop ppy-mir-301b

Accession

MI0014879

Description

Pongo pygmaeus ppy-mir-301b precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

gccgcaggugcucugacgagguugcacuacugugcucugagaagCAGUGCAAUGAUAUUGUCAAAGCaucugggacca
.((.((((((((.((((((.((((((((.((...........)).))))))))....)))))).))))))))))....

Structure

---g  g        c      ---g        a  gugc 
    cc caggugcu ugacga    guugcacu cu    u
    || |||||||| ||||||    |||||||| ||    c
    gg gucuaCGA ACUGUU    UAACGUGA ga    u
acca  -        A      AUAG        C  agag 

Annotation confidence Not enough data

Genome context

chr22: 16950346-16950423 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-301b

Mature ppy-miR-301b

• Accession: MIMAT0015816
• Description: Pongo pygmaeus ppy-miR-301b mature miRNA
• Sequence: 45 - CAGUGCAAUGAUAUUGUCAAAGC - 67
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64