Stem-loop ppy-mir-320b-2

Accession

MI0014886

Description

Pongo pygmaeus ppy-mir-320b-2 precursor miRNA

Gene family

MIPF0000163; mir-320

Sequence

uguuauuuuuugucuucuaccuaagaauucugucucuuaggcuuucucuucucaguuuucccaaaguugagAAAAGCUGGGUUGAGAGGGCAAaaggaaaaaaaaagaauucugucucugacacaauuagauagggaa
.....((((((((((((......((((((((...((((..((((((((..((((((((((.((....)).).)))))))))..))))))))..))))........))))))))......)).......))))))))))

Structure

uguua          -------  uaccua        -----guc    ag        uu         - c  a 
     uuuuuugucu       uc      agaauucu        ucuu  gcuuucuc  cucaguuuu c ca a
     ||||||||||       ||      ||||||||        ||||  ||||||||  ||||||||| | ||  
     aagggauaga       ag      ucuuaaga        ggaa  CGGGAGAG  GGGUCGAAA g gu g
-----          uuaacac  ucucug        aaaaaaaa    AA        UU         A a  u 

Annotation confidence Not enough data

Genome context

chr1: 25489620-25489757 [+]

Mature ppy-miR-320b

• Accession: MIMAT0015822
• Description: Pongo pygmaeus ppy-miR-320b mature miRNA
• Sequence: 72 - AAAAGCUGGGUUGAGAGGGCAA - 93
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64