miRBase entry: ppy-mir-323

Stem-loop ppy-mir-323


Accession
MI0014891
Description
Pongo pygmaeus ppy-mir-323 precursor miRNA
Gene family
MIPF0000018; mir-154


Sequence

uugguacuuggagagAGGUGGUCCGUGGCGCGUUCGCuuuauuuauggcgCACAUUACACGGUCGACCUCUuugcaguaucuaauc
..((((((.(.((((((((.(.(((((..(.((.((((........)))).)).)..))))).).)))))))).))))))).....

Structure
---uu      u g        G U     GC C  U    uua 
     gguacu g agagAGGU G CCGUG  G GU CGCu   u
     |||||| | |||||||| | |||||  | || ||||    
     cuauga c uuUCUCCA C GGCAC  U CA gcgg   u
cuaau      - g        G U     AU A  C    uau 


Annotation confidence Not enough data
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Genome context
chr14: 102587145-102587230 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from ppy-mir-323
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-323-5p

Accession MIMAT0015825
Description Pongo pygmaeus ppy-miR-323-5p mature miRNA
Sequence 16 - AGGUGGUCCGUGGCGCGUUCGC - 37
Evidence not_experimental

Mature ppy-miR-323-3p

Accession MIMAT0015826
Description Pongo pygmaeus ppy-miR-323-3p mature miRNA
Sequence 51 - CACAUUACACGGUCGACCUCU - 71
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64