miRBase entry: ppy-mir-329-1

Stem-loop ppy-mir-329-1


Accession
MI0014896
Description
Pongo pygmaeus ppy-mir-329-1 precursor miRNA
Gene family
MIPF0000110; mir-329


Sequence

gguaccugaagagagguuuucuggguuucuguuucuuuaaugaggaugaAACACACCUGGUUAACCUCUUUuccaguauc
(((((..(((((((((((..((((((...((((((.((......)).)))))).))))))..)))))))))))..)))))

Structure
     cu           uu      uuc      u  aa 
gguac  gaagagagguu  cugggu   uguuuc uu  u
|||||  |||||||||||  ||||||   |||||| ||   
cuaug  cuUUUCUCCAA  GGUCCA   ACAAag ag  g
     ac           UU      --C      u  ga 


Annotation confidence Not enough data
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Genome context
chr14: 102588199-102588278 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from ppy-mir-329-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-329

Accession MIMAT0015832
Description Pongo pygmaeus ppy-miR-329 mature miRNA
Sequence 50 - AACACACCUGGUUAACCUCUUU - 71
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64