miRBase entry: ppy-mir-337

Stem-loop ppy-mir-337


Accession
MI0014901
Description
Pongo pygmaeus ppy-mir-337 precursor miRNA
Gene family
MIPF0000195; mir-337


Sequence

guagucaguaguugggggguggGAACGGCUUCAUACAGGAGUUgaugcacaguuauccagCUCCUAUAUGAUGCCUUUCUUCauccccuucaa
.............((((((((((((.(((.(((((.(((((((((((......))).)))))))).))))).))).))).)))))))))....

Structure
guagucaguaguu         -   C   U     C        -   ca 
             ggggggugg GAA GGC UCAUA AGGAGUUg aug  c
             ||||||||| ||| ||| ||||| |||||||| |||   
             uccccuaCU CUU CCG AGUAU UCCUCgac uau  a
---------aacu         U   U   U     A        c   ug 


Annotation confidence Not enough data
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Genome context
chr14: 102419848-102419940 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from ppy-mir-337
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-337-5p

Accession MIMAT0015838
Description Pongo pygmaeus ppy-miR-337-5p mature miRNA
Sequence 23 - GAACGGCUUCAUACAGGAGUU - 43
Evidence not_experimental

Mature ppy-miR-337-3p

Accession MIMAT0015839
Description Pongo pygmaeus ppy-miR-337-3p mature miRNA
Sequence 61 - CUCCUAUAUGAUGCCUUUCUUC - 82
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64