Stem-loop ppy-mir-339

Accession

MI0014903

Description

Pongo pygmaeus ppy-mir-339 precursor miRNA

Gene family

MIPF0000193; mir-339

Sequence

cggggcggccgcucUCCCUGUCCUCCAGGAGCUCACGugugccugccugugagcgccuucgacgacaggagccggcgcccgccccagugucugcgc
.(((((((.((((..(((((((.((.(((.(((((((.((....)).))))))).)))..)).)))))).)..)))).)))))))...........

Structure

----------c       c    cU -      C  -C   A       u  g 
           ggggcgg cgcu  C CCUGUC UC  AGG GCUCACG gu c
           ||||||| ||||  | |||||| ||  ||| ||||||| ||  
           ccccgcc gcgg  g ggacag ag  ucc cgagugu cg c
cgcgucuguga       c    cc a      c  cu   g       c  u 

Annotation confidence Not enough data

Genome context

chr7: 906035-906130 [-]

Mature ppy-miR-339-5p

• Accession: MIMAT0015842
• Description: Pongo pygmaeus ppy-miR-339-5p mature miRNA
• Sequence: 15 - UCCCUGUCCUCCAGGAGCUCACG - 37
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64