miRBase entry: ppy-mir-340

Stem-loop ppy-mir-340


Accession
MI0014904
Description
Pongo pygmaeus ppy-mir-340 precursor miRNA
Gene family
MIPF0000191; mir-340


Sequence

uuguaucuggugugaUUAUAAAGCAAUGAGACUGAUUgucauaugucguuugugggauccgucucaguuacuuuauagccauaccugguaucuua
..(((((.((((((.((((((((...((((((.((((.(((((.......))))))))).))))))....)))))))).)))))).)))))....

Structure
--uu     u      a        -CAA      U    g     ug 
    guauc ggugug UUAUAAAG    UGAGAC GAUU ucaua  u
    ||||| |||||| ||||||||    |||||| |||| |||||  c
    uaugg ccauac gauauuuc    acucug cuag ggugu  g
auuc     u      c        auug      c    -     uu 


Annotation confidence Not enough data
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Genome context
chr5: 182637250-182637344 [-]

Database links

Mature ppy-miR-340

Accession MIMAT0015843
Description Pongo pygmaeus ppy-miR-340 mature miRNA
Sequence 16 - UUAUAAAGCAAUGAGACUGAUU - 37
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64