miRBase entry: ppy-mir-362

Stem-loop ppy-mir-362


Accession
MI0014909
Description
Pongo pygmaeus ppy-mir-362 precursor miRNA
Gene family
MIPF0000209; mir-362


Sequence

gAAUCCUUGGAACCUAGGUGUGAGUgcuauuucagugcAACACACCUAUUCAAGGAUUCAaa
(((((((((((...((((((((.(((((.....)))))..)))))))))))))))))))...

Structure
---           ACC        -A     a 
   gAAUCCUUGGA   UAGGUGUG  GUgcu u
   |||||||||||   ||||||||  ||||| u
   CUUAGGAACUU   AUCCACAC  cguga u
aaA           ---        AA     c 


Annotation confidence Not enough data
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Genome context
chrX: 50541816-50541877 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from ppy-mir-362
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-362-5p

Accession MIMAT0015850
Description Pongo pygmaeus ppy-miR-362-5p mature miRNA
Sequence 2 - AAUCCUUGGAACCUAGGUGUGAGU - 25
Evidence not_experimental

Mature ppy-miR-362-3p

Accession MIMAT0015851
Description Pongo pygmaeus ppy-miR-362-3p mature miRNA
Sequence 39 - AACACACCUAUUCAAGGAUUCA - 60
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64