miRBase entry: ppy-mir-371

Stem-loop ppy-mir-371


Accession
MI0014916
Description
Pongo pygmaeus ppy-mir-371 precursor miRNA
Gene family
MIPF0000068; mir-290


Sequence

guggcACUCAAACUGUGGGGGCACUuucugcucucuggugaAAGUGCCGCCAUCUUUUGAGUGUuac
((((((((((((..((((.(((((((((.(((....)))))))))))).))))..))))))))))))

Structure
            CU    G         u   c 
guggcACUCAAA  GUGG GGCACUuuc gcu u
||||||||||||  |||| ||||||||| |||  
cauUGUGAGUUU  UACC CCGUGAAag ugg c
            UC    G         -   u 


Annotation confidence Not enough data
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Genome context
chr19: 55571278-55571344 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ppy-mir-371
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-371-5p

Accession MIMAT0015858
Description Pongo pygmaeus ppy-miR-371-5p mature miRNA
Sequence 6 - ACUCAAACUGUGGGGGCACU - 25
Evidence not_experimental

Mature ppy-miR-371-3p

Accession MIMAT0015859
Description Pongo pygmaeus ppy-miR-371-3p mature miRNA
Sequence 42 - AAGUGCCGCCAUCUUUUGAGUGU - 64
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64