Stem-loop sequence ppy-mir-377

Accession MI0014925
Description Pongo pygmaeus miR-377 stem-loop
Gene family MIPF0000018; mir-154
Stem-loop 
uu              c   -    a    - uuu 
  gagcagagguugcc uug guga uucg c   a
  |||||||||||||| ||| |||| |||| |   u
  uuuguuuucaacgg aac cacu aagu g   u
-g              a   a    -    u uau
Get sequence
Genome context
Coordinates (PPYG2) Overlapping transcripts
14: 102624784-102624852 [+]
intergenic
Clustered miRNAs
< 10kb from ppy-mir-377
ppy-mir-382 14: 102616490-102616565 [+]
ppy-mir-134 14: 102616871-102616943 [+]
ppy-mir-668 14: 102617958-102618024 [+]
ppy-mir-485 14: 102618120-102618192 [+]
ppy-mir-453 14: 102618891-102618970 [+]
ppy-mir-154 14: 102622472-102622555 [+]
ppy-mir-496 14: 102623301-102623402 [+]
ppy-mir-377 14: 102624784-102624852 [+]
ppy-mir-541 14: 102627217-102627300 [+]
ppy-mir-409 14: 102628022-102628100 [+]
ppy-mir-412 14: 102628169-102628259 [+]
ppy-mir-369 14: 102628320-102628389 [+]
ppy-mir-410 14: 102628634-102628713 [+]
ppy-mir-656 14: 102629436-102629513 [+]

Mature sequence ppy-miR-377

Accession MIMAT0015867
Sequence

45 -  

aucacacaaaggcaacuuuugu

 - 66

Get sequence
Evidence not experimental

References

1
PMID:20214803 "Genome-wide comparative analysis of microRNAs in three non-human primates" Brameier M BMC Res Notes. 3:64(2010).