miRBase entry: ppy-mir-377

Stem-loop ppy-mir-377

Accession

MI0014925

Description

Pongo pygmaeus ppy-mir-377 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

uugagcagagguugcccuuggugaauucgcuuuauuuauguugaAUCACACAAAGGCAACUUUUGUuug
..((((((((((((((.(((((((.(((((.........).)))))))).))).)))))))))))))).

Structure

uu              c   -    a    - uuu 
  gagcagagguugcc uug guga uucg c   a
  |||||||||||||| ||| |||| |||| |   u
  uuUGUUUUCAACGG AAC CACU Aagu g   u
-g              A   A    -    u uau

Annotation confidence Not enough data

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Genome context

chr14: 102624784-102624852 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from ppy-mir-377

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-377

Accession	MIMAT0015867
Description	Pongo pygmaeus ppy-miR-377 mature miRNA
Sequence	45 - AUCACACAAAGGCAACUUUUGU - 66
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64