Stem-loop sequence ppy-mir-379

Accession MI0014927
Description Pongo pygmaeus miR-379 stem-loop
Gene family MIPF0000126; mir-379
Stem-loop 
    a    a       ga       -  uu u 
agag uggu gacuaug  acguagg cg  a g
|||| |||| |||||||  ||||||| ||  |  
ucuc auca cugguac  uguaucc gu  u a
    a    c       aa       a  uu u
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Genome context
Coordinates (PPYG2) Overlapping transcripts
14: 102583478-102583544 [+]
intergenic
Clustered miRNAs
< 10kb from ppy-mir-379
ppy-mir-379 14: 102583478-102583544 [+]
ppy-mir-411 14: 102584737-102584832 [+]
ppy-mir-299 14: 102585203-102585265 [+]
ppy-mir-380 14: 102586431-102586490 [+]
ppy-mir-1197 14: 102586977-102587064 [+]
ppy-mir-323 14: 102587145-102587230 [+]
ppy-mir-758 14: 102587434-102587521 [+]
ppy-mir-329-1 14: 102588199-102588278 [+]
ppy-mir-329-2 14: 102588514-102588596 [+]
ppy-mir-494 14: 102591073-102591153 [+]
ppy-mir-1193 14: 102591485-102591597 [+]
ppy-mir-543 14: 102593436-102593513 [+]

Mature sequence ppy-miR-379

Accession MIMAT0015869
Sequence

6 -  

ugguagacuauggaacguagg

 - 26

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Evidence not experimental

References

1
PMID:20214803 "Genome-wide comparative analysis of microRNAs in three non-human primates" Brameier M BMC Res Notes. 3:64(2010).