Stem-loop ppy-mir-380

Accession

MI0014928

Description

Pongo pygmaeus ppy-mir-380 precursor miRNA

Gene family

MIPF0000126; mir-379

Sequence

aagaugguugaccauagaacaugcgcuaucucugugucgUAUGUAAUAUGGUCCACUCUU
.....(((.(((((((..(((((((.(((....))).)))))))..))))))).)))...

Structure

aagau   u       ga       c   c 
     ggu gaccaua  acaugcg uau u
     ||| |||||||  ||||||| |||  
     UCA CUGGUAU  UGUAUgc gug c
--UUC   C       AA       u   u 

Annotation confidence Not enough data

Genome context

chr14: 102586431-102586490 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from ppy-mir-380

Mature ppy-miR-380

• Accession: MIMAT0015870
• Description: Pongo pygmaeus ppy-miR-380 mature miRNA
• Sequence: 40 - UAUGUAAUAUGGUCCACUCUU - 60
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64