Stem-loop ppy-mir-422a

Accession

MI0014938

Description

Pongo pygmaeus ppy-mir-422a precursor miRNA

Gene family

MIPF0000548; mir-422

Sequence

gagagaagcACUGGACUGAGGGUCAGAAGGCcugagugucucugcugcagaugggcucucugucccugagccaagcuuuguccucccugg
(((.(((((..(((.((.((((.((((.((((((..(((.......)))..)))))).)))).)))).))))).)))))...))).....

Structure

-----   --a     AC   A  G    U    A      ag   cu 
     gag   gaagc  UGG CU AGGG CAGA GGCcug  ugu  c
     |||   |||||  ||| || |||| |||| ||||||  |||  u
     cuc   uuucg  acc ga uccc gucu ucgggu  acg  g
ggucc   cug     -a   -  g    u    c      ag   uc 

Annotation confidence Not enough data

Genome context

chr15: 60872160-60872249 [-]

Mature ppy-miR-422a

• Accession: MIMAT0015881
• Description: Pongo pygmaeus ppy-miR-422a mature miRNA
• Sequence: 10 - ACUGGACUGAGGGUCAGAAGGC - 31
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64