miRBase entry: ppy-mir-429

Stem-loop ppy-mir-429

Accession

MI0014942

Description

Pongo pygmaeus ppy-mir-429 precursor miRNA

Gene family

MIPF0000019; mir-8

Sequence

cgccggccgaugggcgucuuaccagacaugguuagaccuggccgucugucUAAUACUGUCUGGUAAAACCGUccauccgc
.....((.((((((((..((((((((((..(((((((..........)))))))..))))))))))...)))))))).))

Structure

cgccg  c        -uc          ug       cugg 
     gc gaugggcg   uuaccagaca  guuagac    c
     || ||||||||   ||||||||||  |||||||     
     cg cuaccUGC   AAUGGUCUGU  UAAUcug    c
-----  c        CAA          CA       ucug

Annotation confidence Not enough data

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Genome context

chr1: 229421350-229421429 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-429

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-429

Accession	MIMAT0015886
Description	Pongo pygmaeus ppy-miR-429 mature miRNA
Sequence	51 - UAAUACUGUCUGGUAAAACCGU - 72
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64