miRBase entry: ppy-mir-431

Stem-loop ppy-mir-431


Accession
MI0014943
Description
Pongo pygmaeus ppy-mir-431 precursor miRNA
Gene family
MIPF0000142; mir-431


Sequence

uccugcuuguccugcgaggUGUCUUGCAGGCCGUCAUGCAggccacacugacgguaacguugcaggucgucuugcagggcuucucgcaagacgacauccucaucaccaacgacg
...((.(((((.(((((((.((((((((((.((.(.((((((((........)))....))))).).)).)))))))))).))))))).)))))))..................

Structure
---------------ucc  c     c       U          C  U A     ----   aca 
                  ug uuguc ugcgagg GUCUUGCAGG CG C UGCAg    gcc   c
                  || ||||| ||||||| |||||||||| || | |||||    |||    
                  ac agcag acgcucu cgggacguuc gc g acguu    ugg   u
gcagcaaccacuacuccu  -     a       u          u  u g     gcaa   cag 


Annotation confidence Not enough data
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Genome context
chr14: 102426387-102426500 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from ppy-mir-431
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-431

Accession MIMAT0015887
Description Pongo pygmaeus ppy-miR-431 mature miRNA
Sequence 20 - UGUCUUGCAGGCCGUCAUGCA - 40
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64