Stem-loop ppy-mir-433

Accession

MI0014945

Description

Pongo pygmaeus ppy-mir-433 precursor miRNA

Gene family

MIPF0000177; mir-433

Sequence

ccggggagaaguacggugagccugucauuauucagagaggcuagauccucuguguugagaaggAUCAUGAUGGGCUCCUCGGUGUucuccagg
((..((((((...(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).)))...)))))).))

Structure

  gg      gua   u           u   --------  g     cu 
cc  ggagaa   cgg gagccugucau auu        ca agagg  a
||  ||||||   ||| ||||||||||| |||        || |||||   
gg  ccucuU   GCU CUCGGGUAGUA UAg        gu ucucc  g
  -a      GUG   C           C   gaagaguu  g     ua 

Annotation confidence Not enough data

Genome context

chr14: 102427266-102427358 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ppy-mir-433

Mature ppy-miR-433

• Accession: MIMAT0015889
• Description: Pongo pygmaeus ppy-miR-433 mature miRNA
• Sequence: 64 - AUCAUGAUGGGCUCCUCGGUGU - 85
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64