Stem-loop sequence ppy-mir-450a-2

Accession MI0014950
Description Pongo pygmaeus miR-450a-2 stem-loop
Gene family MIPF0000128; mir-450
Stem-loop 
-ccaaagaaa     u       uuu     u               aa 
          gaugc aaacuau   ugcga guguuccuaauacgu  u
          ||||| |||||||   ||||| |||||||||||||||  a
          cuaug uuugaua   acguu uacagggguuaugua  u
gguauaguaa     u       cuu     u               aa
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Genome context
Coordinates (PPYG2) Overlapping transcripts
X: 133999749-133999848 [-]
intergenic
Clustered miRNAs
< 10kb from ppy-mir-450a-2
ppy-mir-424 X: 134005869-134005966 [-]
ppy-mir-503 X: 134005583-134005653 [-]
ppy-mir-542 X: 134000586-134000681 [-]
ppy-mir-450a-2 X: 133999749-133999848 [-]
ppy-mir-450a-1 X: 133999582-133999672 [-]
ppy-mir-450b X: 133999430-133999507 [-]

Mature sequence ppy-miR-450a

Accession MIMAT0015893
Sequence

23 -  

uuuugcgauguguuccuaaua

 - 43

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Evidence not experimental

References

1
PMID:20214803 "Genome-wide comparative analysis of microRNAs in three non-human primates" Brameier M BMC Res Notes. 3:64(2010).