Stem-loop ppy-mir-450a-2

Accession

MI0014950

Description

Pongo pygmaeus ppy-mir-450a-2 precursor miRNA

Gene family

MIPF0000128; mir-450

Sequence

ccaaagaaagaugcuaaacuauUUUUGCGAUGUGUUCCUAAUAcguaauauaaauguauuggggacauuuugcauucauaguuuuguaucaaugauaugg
.........(((((.(((((((...(((((.(((((((((((((((.......))))))))))))))).)))))...))))))).)))))..........

Structure

-ccaaagaaa     u       UUU     U               aa 
          gaugc aaacuau   UGCGA GUGUUCCUAAUAcgu  u
          ||||| |||||||   ||||| |||||||||||||||  a
          cuaug uuugaua   acguu uacagggguuaugua  u
gguauaguaa     u       cuu     u               aa 

Annotation confidence Not enough data

Genome context

chrX: 133999749-133999848 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from ppy-mir-450a-2

Mature ppy-miR-450a

• Accession: MIMAT0015893
• Description: Pongo pygmaeus ppy-miR-450a mature miRNA
• Sequence: 23 - UUUUGCGAUGUGUUCCUAAUA - 43
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64