Stem-loop ppy-mir-488

Accession

MI0014961

Description

Pongo pygmaeus ppy-mir-488 precursor miRNA

Gene family

MIPF0000318; mir-488

Sequence

gagaaucaucucucccagauaauggcacucucaaacaaguuuccaaguuguUUGAAAGGCUAUUUCUUGGUCagaugacucuc
((((.((((((..((.(((.((((((.((.((((((((.((...)).)))))))).))))))))))).))..)))))).))))

Structure

    a      cu  c   u      a  c        g  u 
gaga ucaucu  cc aga aauggc cu ucaaacaa uu  
|||| ||||||  || ||| |||||| || |||||||| || c
cucu aguaga  GG UCU UUAUCG GA AGUUuguu aa  
    c      CU  U   -      -  A        g  c 

Annotation confidence Not enough data

Genome context

chr1: 73870648-73870730 [+]

Mature ppy-miR-488

• Accession: MIMAT0015907
• Description: Pongo pygmaeus ppy-miR-488 mature miRNA
• Sequence: 52 - UUGAAAGGCUAUUUCUUGGUC - 72
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64