Stem-loop ppy-mir-489

Accession

MI0014962

Description

Pongo pygmaeus ppy-mir-489 precursor miRNA

Gene family

MIPF0000111; mir-489

Sequence

guggcagcuugguggucguauguguggcgccauuuacuugaaccuuuaggaGUGACAUCACAUAUACGGCAGCuaaacugcuac
(((((((.(((((.(((((((((((((.(.((((..(((((....))))))))).).))))))))))))).))))).)))))))

Structure

       c     g             c c    ua     a 
guggcag uuggu gucguaugugugg g cauu  cuuga c
||||||| ||||| ||||||||||||| | ||||  |||||  
caucguc aauCG CGGCAUAUACACU C GUGa  ggauu c
       a     A             A A    --     u 

Annotation confidence Not enough data

Genome context

chr7: 82622602-82622685 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-489

Mature ppy-miR-489

• Accession: MIMAT0015908
• Description: Pongo pygmaeus ppy-miR-489 mature miRNA
• Sequence: 52 - GUGACAUCACAUAUACGGCAGC - 73
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64