miRBase entry: ppy-mir-493

Stem-loop ppy-mir-493


Accession
MI0014966
Description
Pongo pygmaeus ppy-mir-493 precursor miRNA
Gene family
MIPF0000230; mir-493


Sequence

cuggccuccagggcuuuguacaugguaggcuuucauucauucguuugcacauucggUGAAGGUCUACUGUGUGCCAGGcccugugccag
(((((...((((((((.((((((((((((((((((((.................)))))))))))))))))))).)))))))).)))))

Structure
     cuc        u                    cauucgu 
cuggc   cagggcuu guacaugguaggcuuucauu       u
|||||   |||||||| ||||||||||||||||||||       u
gaccg   gucccGGA CGUGUGUCAUCUGGAAGUgg       g
     --u        C                    cuuacac 


Annotation confidence Not enough data
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Genome context
chr14: 102415715-102415803 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-493
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-493

Accession MIMAT0015914
Description Pongo pygmaeus ppy-miR-493 mature miRNA
Sequence 57 - UGAAGGUCUACUGUGUGCCAGG - 78
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64