miRBase entry: ppy-mir-494

Stem-loop ppy-mir-494

Accession

MI0014967

Description

Pongo pygmaeus ppy-mir-494 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

gauacucgaaggagagguuguccguguugucuucucuuuauuuaugaUGAAACAUACACGGGAAACCUCuuuuuuaguauc
((((((.((((((((((((.((((((((((.(((((.........)).)))))).))))))).))))))))))))))))))

Structure

      c            g       -   c   -  uuu 
gauacu gaaggagagguu uccgugu ugu uuc uc   a
|||||| |||||||||||| ||||||| ||| ||| ||   u
cuauga uuuuuuCUCCAA GGGCACA ACA AAG ag   u
      -            A       U   -   U  uau

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr14: 102591073-102591153 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from ppy-mir-494

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-494

Accession	MIMAT0015915
Description	Pongo pygmaeus ppy-miR-494 mature miRNA
Sequence	48 - UGAAACAUACACGGGAAACCUC - 69
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64