Stem-loop ppy-mir-498

Accession

MI0014971

Description

Pongo pygmaeus ppy-mir-498 precursor miRNA

Gene family

MIPF0000463; mir-498

Sequence

aacccuccuugggaagugaagcucaggcugugaUUUCAAGCCAGGGGGCGUUUUUCuguaacuggaugaaaagcaccuccagggcuugaagcucacaguuugagagcaaucgucuaacgaaguu
..(((.....)))........(((((((((((((((((((((.(((((.(((((((...........))))))).)))))..))))))))).)))))))))))).....((((...))))....

Structure

aacccuccuugggaagugaag            -         -A     C       ugua 
                     cucaggcuguga UUUCAAGCC  GGGGG GUUUUUC    a
                     |||||||||||| |||||||||  ||||| |||||||    c
                     gaguuugacacu gaaguucgg  ccucc cgaaaag    u
-uugaagcaaucugcuaacga            c         ga     a       uagg 

Annotation confidence Not enough data

Genome context

chr19: 55448578-55448701 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ppy-mir-498

Mature ppy-miR-498

• Accession: MIMAT0015919
• Description: Pongo pygmaeus ppy-miR-498 mature miRNA
• Sequence: 34 - UUUCAAGCCAGGGGGCGUUUUUC - 56
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64