Stem-loop ppy-mir-499

Accession

MI0014972

Description

Pongo pygmaeus ppy-mir-499 precursor miRNA

Gene family

MIPF0000173; mir-499

Sequence

gcccuguccccugugccuugggcgggcggccgUUAAGACUUGCAGUGAUGUUUaacuccucuccacgugAACAUCACAGCAAGUCUGUGCUgcuucccgucccuacgcugcuugggcagggu
((((((.(((..((((...(((((((.(((.((..((((((((.((((((((((.............)))))))))).))))))))..)).))).)))).)))...)).))..)))))))))

Structure

      u   cu  -  cuu   -    c   c  UA        A          acucc 
gcccug ccc  gu gc   ggg cggg ggc gU  AGACUUGC GUGAUGUUUa     u
|||||| |||  || ||   ||| |||| ||| ||  |||||||| ||||||||||     c
ugggac ggg  cg cg   ccc gccc ucg CG  UCUGAACG CACUACAAgu     u
      -   uu  u  cau   u    u   U  UG        A          gcacc 

Annotation confidence Not enough data

Genome context

chr20: 32202566-32202687 [+]

Mature ppy-miR-499-5p

• Accession: MIMAT0015920
• Description: Pongo pygmaeus ppy-miR-499-5p mature miRNA
• Sequence: 33 - UUAAGACUUGCAGUGAUGUUU - 53
• Evidence: not_experimental

Mature ppy-miR-499-3p

• Accession: MIMAT0015921
• Description: Pongo pygmaeus ppy-miR-499-3p mature miRNA
• Sequence: 70 - AACAUCACAGCAAGUCUGUGCU - 91
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64