Stem-loop ppy-mir-509

Accession

MI0014982

Description

Pongo pygmaeus ppy-mir-509 precursor miRNA

Gene family

MIPF0000130; mir-506

Sequence

caugcugugugugguacccUACUGCAGACAGUGGCAAUCAuguauaauuaaaaaUGAUUGGUACGUCUGCAGGUAGaguacugcaugacacaug
((((.((((((((((((.(((((((((((.(((.(((((((............))))))).)))))))))).)))).))))))))).)))))))

Structure

    c   -         c    -       A   G       guaua 
caug ugu gugugguac cUAC UGCAGAC GUG CAAUCAu     a
|||| ||| ||||||||| |||| ||||||| ||| |||||||      
guac aca uacgucaug GAUG ACGUCUG CAU GUUAGUa     u
    -   g         a    G       -   G       aaaau 

Annotation confidence Not enough data

Genome context

chrX: 147140172-147140265 [-]

Mature ppy-miR-509-5p

• Accession: MIMAT0015933
• Description: Pongo pygmaeus ppy-miR-509-5p mature miRNA
• Sequence: 20 - UACUGCAGACAGUGGCAAUCA - 40
• Evidence: not_experimental

Mature ppy-miR-509-3p

• Accession: MIMAT0015934
• Description: Pongo pygmaeus ppy-miR-509-3p mature miRNA
• Sequence: 55 - UGAUUGGUACGUCUGCAGGUAG - 76
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64