miRBase entry: ppy-mir-512-2

Stem-loop ppy-mir-512-2


Accession
MI0014989
Description
Pongo pygmaeus ppy-mir-512-2 precursor miRNA
Gene family
MIPF0000518; mir-512


Sequence

gguacuucucagucuguggcgcucagccuugggggcacuuucuggugccagaaugaAAGUGCUGUCAUAGCUGAGGUCcaaugacugaggcgagcacc
(((.((((((((((..(((..((((((..(((.(((((((((............))))))))).)))..))))))..)))..)))))))..))).)))

Structure
   a   --       ug   cg      cu   g         uggug 
ggu cuu  cucaguc  ugg  cucagc  ugg ggcacuuuc     c
||| |||  |||||||  |||  ||||||  ||| |||||||||      
cca gag  gagucag  acC  GAGUCG  ACU UCGUGAAag     c
   c   cg       ua   UG      AU   G         uaaga 


Annotation confidence Not enough data
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Genome context
chr19: 55444850-55444947 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from ppy-mir-512-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-512-3p

Accession MIMAT0015937
Description Pongo pygmaeus ppy-miR-512-3p mature miRNA
Sequence 57 - AAGUGCUGUCAUAGCUGAGGUC - 78
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64