Stem-loop sequence ppy-mir-515-1

Accession MI0014997
Description Pongo pygmaeus miR-515-1 stem-loop
Gene family MIPF0000020; mir-515
Stem-loop 
     u     c  u           a    uu      gu 
ucuca gcagu au cuccaaaagaa gcac  ucuguu  c
||||| ||||| || ||||||||||| ||||  ||||||  u
agagu uguca ug gagguuuucuu cgug  agacga  g
     u     u  c           c    --      aa
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Genome context
Coordinates (PPYG2) Overlapping transcripts
19: 55460257-55460339 [+]
intergenic
Clustered miRNAs
< 10kb from ppy-mir-515-1
ppy-mir-519e 19: 55454916-55455002 [+]
ppy-mir-520f 19: 55457107-55457193 [+]
ppy-mir-515-1 19: 55460257-55460339 [+]
ppy-mir-526a-2 19: 55461733-55461798 [+]
ppy-mir-1283a 19: 55463738-55463824 [+]
ppy-mir-520a 19: 55466122-55466202 [+]
ppy-mir-526b 19: 55469606-55469691 [+]

Mature sequence ppy-miR-515-5p

Accession MIMAT0015943
Sequence

14 -  

uucuccaaaagaaagcacuuucug

 - 37

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Evidence not experimental

Mature sequence ppy-miR-515-3p

Accession MIMAT0015944
Sequence

51 -  

gagugccuucuuuuggagcguu

 - 72

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Evidence not experimental

References

1
PMID:20214803 "Genome-wide comparative analysis of microRNAs in three non-human primates" Brameier M BMC Res Notes. 3:64(2010).