miRBase entry: ppy-mir-526a

Stem-loop ppy-mir-526a


Accession
MI0015034
Description
Pongo pygmaeus ppy-mir-526a precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

gugaccCUCUAGAGGGAAGCACUUUCUguuugaaagaaaggaaagugcauccuuuuagaggauuac
((((.((((((((((((.(((((((((.(((....))).))))))))).)))))))))))).))))

Structure
    c            A         g   g 
guga cCUCUAGAGGGA GCACUUUCU uuu a
|||| |||||||||||| ||||||||| |||  
cauu ggagauuuuccu cgugaaagg aag a
    a            a         a   a 


Annotation confidence Not enough data
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Genome context
chr19: 55461733-55461798 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from ppy-mir-526a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-526a

Accession MIMAT0015984
Description Pongo pygmaeus ppy-miR-526a mature miRNA
Sequence 7 - CUCUAGAGGGAAGCACUUUCU - 27
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64