miRBase entry: ppy-mir-526b

Stem-loop ppy-mir-526b


Accession
MI0015035
Description
Pongo pygmaeus ppy-mir-526b precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

ucaggcugugaccCUCUUGAGGGAAGCACUUUCUGUugucugaaaagaaaagcaagugcuuccuuuuuaugaggcuuacugucuga
((((((.((((.((((..(((((((((((((.((....(((....)))..)).)))))))))))))....)))).)))).))))))

Structure
      u    c    --UU             U  GUug   g 
ucaggc guga cCUC    GAGGGAAGCACUU CU    ucu a
|||||| |||| ||||    ||||||||||||| ||    |||  
agucug cauu ggag    uuuccuucgugaa ga    aga a
      u    c    uauu             c  --aa   a 


Annotation confidence Not enough data
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Genome context
chr19: 55469606-55469691 [+]
Clustered miRNAs
9 other miRNAs are < 10 kb from ppy-mir-526b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-526b

Accession MIMAT0015985
Description Pongo pygmaeus ppy-miR-526b mature miRNA
Sequence 14 - CUCUUGAGGGAAGCACUUUCUGU - 36
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64