Stem-loop ppy-mir-527

Accession

MI0015036

Description

Pongo pygmaeus ppy-mir-527 precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

ucucaugcugugacuCUGCAAAGGGAAGCCCUUUCuguugucuaaaagaaaagaaagugcuucccuuugguagguuacgguuugaga
(((((.((((((((.((((((((((((((.((((((....(((...)))..)))))).)))))))))).)))))))))))).)))))

Structure

     u        u    -          C      guug   a 
ucuca gcugugac CUGC AAAGGGAAGC CUUUCu    ucu  
||||| |||||||| |||| |||||||||| ||||||    ||| a
agagu uggcauug gaug uuucccuucg gaaaga    aga  
     u        -    g          u      --aa   a 

Annotation confidence Not enough data

Genome context

chr19: 55533164-55533250 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from ppy-mir-527

Mature ppy-miR-527

• Accession: MIMAT0015986
• Description: Pongo pygmaeus ppy-miR-527 mature miRNA
• Sequence: 16 - CUGCAAAGGGAAGCCCUUUC - 35
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64