miRBase entry: ppy-mir-551b

Stem-loop ppy-mir-551b


Accession
MI0015046
Description
Pongo pygmaeus ppy-mir-551b precursor miRNA
Gene family
MIPF0000360; mir-551


Sequence

agaugugcucuccuggcccaugaaaucaagugugggugagaccuggugcagaacgggaagGCGACCCAUACUUGGUUUCAGaggcugugagaaua
........((((.(((((..(((((((((((((((((....((((........))))......)))))))))))))))))..))))).))))...

Structure
agaugugc    c     ca                 --gaga    gug 
        ucuc uggcc  ugaaaucaagugugggu      ccug   c
        |||| |||||  |||||||||||||||||      ||||    
        agag gucgg  ACUUUGGUUCAUACCCA      gggc   a
-----aua    u     aG                 GCGgaa    aag 


Annotation confidence Not enough data
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Genome context
chr3: 172088663-172088757 [+]

Database links

Mature ppy-miR-551b

Accession MIMAT0015998
Description Pongo pygmaeus ppy-miR-551b mature miRNA
Sequence 61 - GCGACCCAUACUUGGUUUCAG - 81
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64