miRBase entry: ppy-mir-557

Stem-loop ppy-mir-557


Accession
MI0015051
Description
Pongo pygmaeus ppy-mir-557 precursor miRNA
Gene family
MIPF0000520; mir-557


Sequence

agaaugggcaaaugaacaguaaauuuggaggccuggggcccucccugcugcuggagaaguGUUUGCAUGGGUGGGCCUUGUCUuugaaaggaggugga
....((..(....)..)).....(((((((((..(((((((.((((((((((.....))))...))).))).))))))))))))))))..........

Structure
agaaugggcaaaugaacaguaaa         cu       u   -   ---    g 
                       uuuggaggc  ggggccc ccc ugc   ugcu g
                       |||||||||  ||||||| ||| |||   |||| a
                       aaguuUCUG  UUCCGGG GGG ACG   Guga g
-------------agguggagga         --       U   U   UUU    a 


Annotation confidence Not enough data
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Genome context
chr1: 82803839-82803936 [-]

Database links

Mature ppy-miR-557

Accession MIMAT0016004
Description Pongo pygmaeus ppy-miR-557 mature miRNA
Sequence 61 - GUUUGCAUGGGUGGGCCUUGUCU - 83
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64