Stem-loop ppy-mir-562

Accession

MI0015054

Description

Pongo pygmaeus ppy-mir-562 precursor miRNA

Gene family

MIPF0000512; mir-562

Sequence

agugaaauugcuaggucauauggucagucuacuuuuagaguaauugugaaacuguuuuccAAAGUAGCUGUACCAUUUGCacucccuguggcaau
......((((((((((((.((((((((.(((((((..(((.(((.((...)).)))))).)))))))))).))))).)).))).....)))))))

Structure

agugaa       -----   -  u     -   u       ua   u   u  g 
      auugcua     ggu ca auggu cag cuacuuu  gag aau gu  
      |||||||     ||| || ||||| ||| |||||||  ||| ||| || a
      uaacggu     uca GU UACCA GUC GAUGAAA  cuu uug ca  
------       guccc   C  U     U   -       -c   -   u  a 

Annotation confidence Not enough data

Genome context

chr2B: 124569687-124569781 [+]

Mature ppy-miR-562

• Accession: MIMAT0016007
• Description: Pongo pygmaeus ppy-miR-562 mature miRNA
• Sequence: 61 - AAAGUAGCUGUACCAUUUGC - 80
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64