Stem-loop ppy-mir-564

Accession

MI0015056

Description

Pongo pygmaeus ppy-mir-564 precursor miRNA

Gene family

MIPF0000612; mir-564

Sequence

cgggcggcgggcgccAGGCACGGUGGCAGCAGGCaacauggcugagaggccggggccuccgggcggcgccgugucagcgaccgccuacccugac
.(((.(((((.(((..(((((((((.(.((((((....(((((....)))))..))))....))).))))))))).))).)))))..)))....

Structure

---c   -c     g   cA         G A  ----    aaca     g 
    ggg  ggcgg cgc  GGCACGGUG C GC    AGGC    uggcu a
    |||  ||||| |||  ||||||||| | ||    ||||    |||||  
    ccc  ccgcc gcg  cugugccgc g cg    uccg    gccgg g
cagu   au     a   -a         g -  ggcc    --gg     a 

Annotation confidence Not enough data

Genome context

chr3: 101745122-101745215 [-]

Mature ppy-miR-564

• Accession: MIMAT0016009
• Description: Pongo pygmaeus ppy-miR-564 mature miRNA
• Sequence: 16 - AGGCACGGUGGCAGCAGGC - 34
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64