miRBase entry: ppy-mir-571

Stem-loop ppy-mir-571


Accession
MI0015061
Description
Pongo pygmaeus ppy-mir-571 precursor miRNA
Gene family
MIPF0000757; mir-571


Sequence

ccucaguaagaccaagcucagugugccauuuccuugucuguagccaugucugugggcucuUGAGUUGGCCAUCUGAGUGAGggccugcuuauuc
....((((.(.((..((((((((.((((.(((...((((((((......))))))))....))).)))))).))))))..)).).)))).....

Structure
-ccuc    a a  aa      -  u    u   -cuu        cc 
     agua g cc  gcucag ug gcca uuc    gucuguag  a
     |||| | ||  |||||| || |||| |||    ||||||||   
     ucgu c gG  UGAGUC AC CGGU GAG    cggguguc  u
cuuau    c g  AG      U  -    U   Uucu        ug 


Annotation confidence Not enough data
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Genome context
chr4: 342989-343082 [+]

Database links

Mature ppy-miR-571

Accession MIMAT0016014
Description Pongo pygmaeus ppy-miR-571 mature miRNA
Sequence 61 - UGAGUUGGCCAUCUGAGUGAG - 81
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64