Stem-loop ppy-mir-593

Accession

MI0015080

Description

Pongo pygmaeus ppy-mir-593 precursor miRNA

Gene family

MIPF0000503; mir-593

Sequence

cccccagagucugucaggcaucagccaggcauugcucagccccuuucccucugggggagcaaggaguggugcuggguuUGUCUCUGCUGGGGUUUCUccu
.((((((((......(((((..((((.((((((((((.(((((((.......))))).))...)))))))))).))))))))))).))))))........

Structure

-------c      -  ucuguc     uc    a          --a  -     uc 
        ccccag ag      aggca  agcc ggcauugcuc   gc cccuu  c
        |||||| ||      |||||  |||| ||||||||||   || |||||  c
        GGGGUC UC      UCUGU  uugg ucguggugag   cg ggggg  u
uccUCUUU      G  ------     --    g          gaa  a     uc 

Annotation confidence Not enough data

Genome context

chr7: 125137469-125137568 [+]

Mature ppy-miR-593

• Accession: MIMAT0016036
• Description: Pongo pygmaeus ppy-miR-593 mature miRNA
• Sequence: 79 - UGUCUCUGCUGGGGUUUCU - 97
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64