Stem-loop ppy-mir-596

Accession

MI0015082

Description

Pongo pygmaeus ppy-mir-596 precursor miRNA

Gene family

MIPF0000808; mir-596

Sequence

agcacagccucucccAAGCCUGCCUGGCUCCUCGGGaaccugccucccgcacggcagccgccgcccuucagaggccg
......((((((...(((...((.(((((((.(((((.......)))))...)).)))))..)).))).))))))..

Structure

agcaca      ccc   CCU  -C     -  --U     ac 
      gccucu   AAG   GC  UGGCU CC   CGGGa  c
      ||||||   |||   ||  ||||| ||   |||||  u
      cggaga   uuc   cg  gccga gg   gcccu  g
----gc      --c   --c  cc     c  cac     cc 

Annotation confidence Not enough data

Genome context

chr8: 1664875-1664951 [+]

Mature ppy-miR-596

• Accession: MIMAT0016038
• Description: Pongo pygmaeus ppy-miR-596 mature miRNA
• Sequence: 16 - AAGCCUGCCUGGCUCCUCGGG - 36
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64