miRBase entry: ppy-mir-623

Stem-loop ppy-mir-623


Accession
MI0015107
Description
Pongo pygmaeus ppy-mir-623 precursor miRNA
Gene family
MIPF0000798; mir-623


Sequence

guacacaguagaagcGUCCCUUGCAGGGGCUGUUGGGUugcauccuaagcugugcuggagcuucccaauguacucuguagaugucuuugcaccuucug
.......(((((.(((((...(((((((..(((((((..((.(((..(((...))))))))..)))))))..)))))))))))).)))))........

Structure
-guacaca     a     CCU       GC       Uu  a   ua   u 
        guaga gcGUC   UGCAGGG  UGUUGGG  gc ucc  agc  
        ||||| |||||   |||||||  |||||||  || |||  ||| g
        cguuu uguag   augucuc  guaaccc  cg agg  ucg  
gucuucca     c     ---       au       uu  -   --   u 


Annotation confidence Not enough data
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Genome context
chr13: 101696982-101697079 [+]

Database links

Mature ppy-miR-623

Accession MIMAT0016064
Description Pongo pygmaeus ppy-miR-623 mature miRNA
Sequence 16 - GUCCCUUGCAGGGGCUGUUGGGU - 38
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64