Stem-loop ppy-mir-638

Accession

MI0015118

Description

Pongo pygmaeus ppy-mir-638 precursor miRNA

Gene family

MIPF0000486; mir-638

Sequence

gugagcgggcgcggcAGGGAUCGCGGGCGGUCGGCGGCCCuagggcgcggagggcggaccgggaauggcgcgcccuggcgcccgccggcguaacugcggcgcu
.......(((((.((((..(.(((.(((((.(((((.((...)).)))..((((((..(((....)))..))))))..)).))))).))))..)))).)))))

Structure

gugagcg     g    GG U   G     U  ------------------------------   G  C 
       ggcgc gcAG  A CGC GGCGG CG                              GCG CC  
       ||||| ||||  | ||| ||||| ||                              ||| || u
       ucgcg cguc  u gcg ccgcc gc                              cgc gg  
-------     g    aa -   g     c  ggucccgcgcgguaagggccaggcgggagg   g  a 

Annotation confidence Not enough data

Genome context

chr19: 10866087-10866189 [+]

Mature ppy-miR-638

• Accession: MIMAT0016076
• Description: Pongo pygmaeus ppy-miR-638 mature miRNA
• Sequence: 16 - AGGGAUCGCGGGCGGUCGGCGGCCC - 40
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64