Stem-loop ppy-mir-640

Accession

MI0015120

Description

Pongo pygmaeus ppy-mir-640 precursor miRNA

Gene family

MIPF0000494; mir-640

Sequence

gugacccugggcaaguuccugaagaucagacacaucagauccuauaucuguaaaaugggcAUGAUCCAGGAACCUGCCUCUacgguugccuugggg
((((((..(((((.(((((((..(((((....((((((((.....)))))....)))....)))))))))))).)))))....)))))).......

Structure

-------      --cu     a       aa     gaca   ----     c 
       gugacc    gggca guuccug  gauca    cau    cagau c
       ||||||    ||||| |||||||  |||||    |||    ||||| u
       cguugg    UCCGU CAAGGAC  CUAGU    gua    gucua a
gggguuc      caUC     C       --     Acgg   aaau     u 

Annotation confidence Not enough data

Genome context

chr19: 19860233-19860328 [+]

Mature ppy-miR-640

• Accession: MIMAT0016078
• Description: Pongo pygmaeus ppy-miR-640 mature miRNA
• Sequence: 61 - AUGAUCCAGGAACCUGCCUCU - 81
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64