Stem-loop ppy-mir-648

Accession

MI0015124

Description

Pongo pygmaeus ppy-mir-648 precursor miRNA

Gene family

MIPF0000476; mir-648

Sequence

aucacagacaccuccAAGUGUGCAGGGCACUGGUgggggccagggcgggcccagcgaaagugcaggaccuggcacuuagucguaagugagggug
.((((..((..((..((((((.(((((((((..((.(((((......)))))..))..)))))....))))))))))))..))..)))).....

Structure

----a    ag  ac  cc      G    ----     GG  -g     ag 
     ucac  ac  cu  AAGUGU CAGG    GCACU  Ug  gggcc  g
     ||||  ||  ||  |||||| ||||    |||||  ||  |||||   
     agug  ug  ga  uucacg gucc    cguga  gc  cccgg  g
guggg    aa  cu  --      -    agga     aa  ga     gc 

Annotation confidence Not enough data

Genome context

chr22: 14624419-14624512 [-]

Mature ppy-miR-648

• Accession: MIMAT0016082
• Description: Pongo pygmaeus ppy-miR-648 mature miRNA
• Sequence: 16 - AAGUGUGCAGGGCACUGGU - 34
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64