miRBase entry: ppy-mir-653

Stem-loop ppy-mir-653


Accession
MI0015128
Description
Pongo pygmaeus ppy-mir-653 precursor miRNA
Gene family
MIPF0000435; mir-653


Sequence

uucauuccuucaGUGUUGAAACAAUCUCUACUGaaccagcuucaaacaaguucacuggaguuuguuucaauauugcaagaaugauaagauggaagc
.((((((...((((((((((((((.(((((.(((((.............))))).))))).))))))))))))))...))))))............

Structure
-----------u      cuu              U     C     cagcu 
            ucauuc   caGUGUUGAAACAA CUCUA UGaac     u
            ||||||   |||||||||||||| ||||| |||||     c
            aguaag   guuauaacuuuguu gaggu acuug     a
cgaagguagaau      aac              u     c     aacaa 


Annotation confidence Not enough data
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Genome context
chr7: 82623685-82623780 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-653
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-653

Accession MIMAT0016086
Description Pongo pygmaeus ppy-miR-653 mature miRNA
Sequence 13 - GUGUUGAAACAAUCUCUACUG - 33
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64