Stem-loop sequence ppy-mir-656

Accession MI0015131
Description Pongo pygmaeus miR-656 stem-loop
Gene family MIPF0000018; mir-154
Stem-loop 
----------cu    u      c     ag       cuu  u 
            gaaa agguug cugug  guguuca   uc a
            |||| |||||| |||||  |||||||   || u
            cuuu uccaac gacau  uauaagu   ag a
cuaagcuauagc    c      u     au       ---  u
Get sequence
Genome context
Coordinates (PPYG2) Overlapping transcripts
14: 102629436-102629513 [+]
intergenic
Clustered miRNAs
< 10kb from ppy-mir-656
ppy-mir-154 14: 102622472-102622555 [+]
ppy-mir-496 14: 102623301-102623402 [+]
ppy-mir-377 14: 102624784-102624852 [+]
ppy-mir-541 14: 102627217-102627300 [+]
ppy-mir-409 14: 102628022-102628100 [+]
ppy-mir-412 14: 102628169-102628259 [+]
ppy-mir-369 14: 102628320-102628389 [+]
ppy-mir-410 14: 102628634-102628713 [+]
ppy-mir-656 14: 102629436-102629513 [+]

Mature sequence ppy-miR-656

Accession MIMAT0016090
Sequence

43 -  

aauauuauacagucaaccucu

 - 63

Get sequence
Evidence not experimental

References

1
PMID:20214803 "Genome-wide comparative analysis of microRNAs in three non-human primates" Brameier M BMC Res Notes. 3:64(2010).