miRBase entry: ppy-mir-656

Stem-loop ppy-mir-656


Accession
MI0015131
Description
Pongo pygmaeus ppy-mir-656 precursor miRNA
Gene family
MIPF0000018; mir-154


Sequence

cugaaauagguugccugugagguguucacuuucuauaugaugAAUAUUAUACAGUCAACCUCUuuccgauaucgaauc
..((((.((((((.(((((.((((((((...((.....)))))))))).))))).)))))).))))............

Structure
----------cu    u      c     a        cuu  u 
            gaaa agguug cugug gguguuca   uc a
            |||| |||||| ||||| ||||||||   || u
            cuuU UCCAAC GACAU UUAUAAgu   ag a
cuaagcuauagc    C      U     A        ---  u 


Annotation confidence Not enough data
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Genome context
chr14: 102629436-102629513 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from ppy-mir-656
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-656

Accession MIMAT0016090
Description Pongo pygmaeus ppy-miR-656 mature miRNA
Sequence 43 - AAUAUUAUACAGUCAACCUCU - 63
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64