Stem-loop ppy-mir-660

Accession

MI0015133

Description

Pongo pygmaeus ppy-mir-660 precursor miRNA

Gene family

MIPF0000113; mir-188

Sequence

cugcuccuucucccaUACCCAUUGCAUAUCGGAGUUGugaauucucaaaacaccuccugugugcauggauuacaggagggugagccuugucaucgug
..((((.((((((.....((((.((((((.((((.(((...........))).)))).))))))))))......)))))).))))............

Structure

----------cu    c      -caUAC    U      C    U   gaau 
            gcuc uucucc      CCAU GCAUAU GGAG UGu    u
            |||| ||||||      |||| |||||| |||| |||    c
            cgag gggagg      ggua cgugug ccuc aca    u
gugcuacuguuc    u      acauua    -      u    c   aaac 

Annotation confidence Not enough data

Genome context

chrX: 50546331-50546427 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from ppy-mir-660

Mature ppy-miR-660

• Accession: MIMAT0016092
• Description: Pongo pygmaeus ppy-miR-660 mature miRNA
• Sequence: 16 - UACCCAUUGCAUAUCGGAGUUG - 37
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64