Stem-loop sequence ppy-mir-668

Accession MI0015136
Description Pongo pygmaeus miR-668 stem-loop
Gene family MIPF0000357; mir-668
Stem-loop 
    a   c   ---        g         aa 
ggua gug gcc   ucggguga caugcacuu  u
|||| ||| |||   |||||||| |||||||||   
ccau cac cgg   ggcucacu guaugugga  g
    -   c   cuc        -         gu
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Genome context
Coordinates (PPYG2) Overlapping transcripts
14: 102617958-102618024 [+]
intergenic
Clustered miRNAs
< 10kb from ppy-mir-668
ppy-mir-381 14: 102608058-102608132 [+]
ppy-mir-487b 14: 102608591-102608674 [+]
ppy-mir-539 14: 102609453-102609530 [+]
ppy-mir-889 14: 102610033-102610111 [+]
ppy-mir-544 14: 102610806-102610896 [+]
ppy-mir-655 14: 102611698-102611794 [+]
ppy-mir-487a 14: 102614611-102614690 [+]
ppy-mir-382 14: 102616490-102616565 [+]
ppy-mir-134 14: 102616871-102616943 [+]
ppy-mir-668 14: 102617958-102618024 [+]
ppy-mir-485 14: 102618120-102618192 [+]
ppy-mir-453 14: 102618891-102618970 [+]
ppy-mir-154 14: 102622472-102622555 [+]
ppy-mir-496 14: 102623301-102623402 [+]
ppy-mir-377 14: 102624784-102624852 [+]
ppy-mir-541 14: 102627217-102627300 [+]

Mature sequence ppy-miR-668

Accession MIMAT0016095
Sequence

44 -  

ugucacucggcucggcccacuac

 - 66

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Evidence not experimental

References

1
PMID:20214803 "Genome-wide comparative analysis of microRNAs in three non-human primates" Brameier M BMC Res Notes. 3:64(2010).