miRBase entry: ppy-mir-671

Stem-loop ppy-mir-671


Accession
MI0015137
Description
Pongo pygmaeus ppy-mir-671 precursor miRNA
Gene family
MIPF0000358; mir-671


Sequence

gcaggugaacuggcaggccaggaagaggAGGAAGCCCUGGAGGGGCUGGAGgugauggauguuuuccUCCGGUUCUCAGGGCUCCACCucuuucgggccguagagccagggcuggugc
(((...(..(((((.((((.((((((((.(((.((((((..(((((((((((.((.......)).)))))))))))))))))))).)))))))).)))).....)))))..)...)))

Structure
   ggu aa     ----a    a        A   A      GA           u  ug 
gca   g  cuggc     ggcc ggaagagg GGA GCCCUG  GGGGCUGGAGg ga  g
|||   |  |||||     |||| |||||||| ||| ||||||  ||||||||||| ||  a
cgu   c  gaccg     ccgg cuuucuCC CCU CGGGAC  UCUUGGCCUcc uu  u
   ggu gg     agaug    g        A   -      --           u  ug 


Annotation confidence Not enough data
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Genome context
chr7: 148926025-148926142 [+]

Database links

Mature ppy-miR-671-5p

Accession MIMAT0016096
Description Pongo pygmaeus ppy-miR-671-5p mature miRNA
Sequence 29 - AGGAAGCCCUGGAGGGGCUGGAG - 51
Evidence not_experimental

Mature ppy-miR-671-3p

Accession MIMAT0016097
Description Pongo pygmaeus ppy-miR-671-3p mature miRNA
Sequence 68 - UCCGGUUCUCAGGGCUCCACC - 88
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64