miRBase entry: ppy-mir-885

Stem-loop ppy-mir-885


Accession
MI0015155
Description
Pongo pygmaeus ppy-mir-885 precursor miRNA
Gene family
MIPF0000532; mir-885


Sequence

ccgcacucucUCCAUUACACUACCCUGCCUCUucuccaugagAGGCAGCGGGGUGUAGUGGAUAgagcacgggu
(((..((((.(((((((((((.(((((((((((......))))))))).))))))))))))).))))..)))..

Structure
--   ca    c           A  -         cu 
  ccg  cucu UCCAUUACACU CC CUGCCUCUu  c
  |||  |||| ||||||||||| || |||||||||   
  ggc  gagA AGGUGAUGUGG GG GACGGAgag  c
ug   ac    U           -  C         ua 


Annotation confidence Not enough data
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Genome context
chr3: 59523163-59523236 [+]

Database links

Mature ppy-miR-885-5p

Accession MIMAT0016118
Description Pongo pygmaeus ppy-miR-885-5p mature miRNA
Sequence 11 - UCCAUUACACUACCCUGCCUCU - 32
Evidence not_experimental

Mature ppy-miR-885-3p

Accession MIMAT0016119
Description Pongo pygmaeus ppy-miR-885-3p mature miRNA
Sequence 43 - AGGCAGCGGGGUGUAGUGGAUA - 64
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64