Stem-loop ppy-mir-887

Accession

MI0015157

Description

Pongo pygmaeus ppy-mir-887 precursor miRNA

Gene family

MIPF0000554; mir-887

Sequence

gugcagauccuugggagcccuguuagacucuggauuuuacacuuggaGUGAACGGGCGCCAUCCCGAGGcuuugcacag
(((((((.((((((((((((((((..(((((((.........))))))).)))))).))..)))))))).)))))))..

Structure

--       u        --  -      ag       auu 
  gugcaga ccuuggga  gc ccuguu  acucugg   u
  ||||||| ||||||||  || ||||||  |||||||   u
  cacguuu GGAGCCCU  CG GGGCAA  UGagguu   a
ga       c        AC  C      -G       cac 

Annotation confidence Not enough data

Genome context

chr5: 16799560-16799638 [+]

Mature ppy-miR-887

• Accession: MIMAT0016122
• Description: Pongo pygmaeus ppy-miR-887 mature miRNA
• Sequence: 48 - GUGAACGGGCGCCAUCCCGAGG - 69
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64